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In a chromosome,which of the following is TRUE?


A) RNAs of different genes can be transcribed off either DNA strand,but always 5' to 3'.
B) RNAs of different genes can be transcribed off either DNA strand,but always 3' to 5'.
C) The RNAs of all genes are synthesized 5' to 3' off the same DNA strand.
D) The RNAs of all genes are synthesized 3' to 5' off the same DNA strand.
E) Different genes can be transcribed off either strand,some in the 5' to 3' direction and some in the 3' to 5' direction.

F) C) and D)
G) A) and B)

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The conserved adenine nucleotide in introns serves as the:


A) site for intron recognition for the spliceosome.
B) branch point for the formation of the intronic "lariat."
C) key point for ribosome assembly and initiation of translation.
D) initial site of intronic RNA digestion and removal.
E) molecular signal for RNA splicing.

F) B) and E)
G) None of the above

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What would the minimum word (codon)size be if the number of different bases in the mRNA were a)two;b)three;c)five.Give your reasoning.Assume that all other features of the translation of mRNA into protein are the same as what we now know.

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Note: The number of ...

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Of the three classes of functional RNAs,rRNA and tRNA exist in both eukaryotes and prokaryotes.However,snRNAs exist only in one of these types of organisms.Do snRNAs exist in prokaryotes or eukaryotes? Explain why they are only found in that type of organism.

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Eukaryotes.snRNAs play a role ...

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Suppose that you have sequenced five genes,including the putative promoter region of each gene,that are involved in the cold acclimation process in Arabidopsis.Each of the five genes is expressed only when the temperature falls below a certain temperature.You know that a specific transcription factor (CBF1)binds somewhere between -200 and -250 of these genes to initiate transcription.How could you use the sequences to determine the DNA sequence motif that is bound by CBF1?

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Align the five sequences and look for a ...

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Which of the following is/are TRUE about functional RNA?


A) Functional RNAs do not encode proteins and are active as RNA.
B) Some functional RNAs encode proteins.
C) Examples of functional RNA include mRNA,tRNA,and rRNA.
D) Examples of functional RNA include tRNA,rRNA,snRNA,and miRNA.
E) Functional RNAs do not encode proteins,and examples include tRNA,rRNA,snRNA,and miRNA.

F) B) and E)
G) All of the above

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The functional equivalent of the TATA binding protein in prokaryotes is:


A) a sigma subunit.
B) a holoenzyme.
C) the Rho factor.
D) TFIID.
E) hairpin loops.

F) A) and C)
G) None of the above

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Which of the following is/are role(s) of the 5′ cap?


A) The cap helps the RNA polymerase find the promoter and initiate transcription.
B) The cap plays a role in the removal of introns.
C) The cap acts as a binding site for the ribosome.
D) The cap protects the RNA from degradation.
E) The cap acts as a binding site for the ribosome and protects the RNA from degradation.

F) B) and E)
G) A) and B)

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Following splicing,the conserved adenosine nucleotide within the intron displays an unusual array of bonds,including:


A) a phosphate attached to the 4-carbon of the adenine nitrogenous base.
B) phosphodiester bonds attached at three places on the ribose (2′,3′,5′) .
C) additional methyl (-CH3) groups added to the adenine.
D) a DNA strand attached to the spliced RNA.
E) attachment to an arginine amino acid.

F) D) and E)
G) A) and E)

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The -10 and -35 boxes found in most bacterial promoter elements were discovered by:


A) comparing the DNA sequences in front of highly expressed genes and determining nucleic acids that were common (consensus) .
B) the finding that RNA polymerase begins translation when a 10-nucleotide followed by a 35-nucleotide repeat of guanine ("G") are encountered.
C) comparing bacterial promoters to known eukaryotic promoters.
D) examining data from the human genome project.
E) Robert Koch as he characterized the microbe that causes tuberculosis.

F) C) and E)
G) A) and C)

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The role of most microRNAs within a eukaryotic cell is to:


A) regulate the splicing of primary transcripts to mRNAs.
B) bind with other RNAs to stabilize their secondary structure.
C) associate with ribosomal proteins to facilitate translation.
D) regulate RNA polymerase activity in the nucleus.
E) repress the expression of genes by destroying mRNAs.

F) All of the above
G) A) and E)

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Pulse-chase experiments provided evidence that:


A) RNA is made of ribose sugars rather than deoxyribose.
B) RNA is an information-transfer intermediary between DNA and protein.
C) many viruses have RNA genomes.
D) RNA is capable of catalyzing biological reactions.
E) RNA is synthesized in short pulses of transcriptional activity.

F) A) and C)
G) B) and D)

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Template strand DNA and encoded RNA are:


A) complimentary of one another with antiparallel orientation.
B) complimentary of one another but share the same 5′-3′ orientation.
C) identical sequences with the exception of U substituted for T.
D) different with regard to the inclusion of introns.
E) interconverted via nucleic acid remodeling.

F) B) and D)
G) D) and E)

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