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The primary significance of the 1000 Genomes Project is to


A) take into account the variation in human genomes across populations.
B) account for the inherent error rate of sequencing by including a greater sample size.
C) identify the 1000 most important genes to human health.
D) trace human ancestors back 1000 years.

E) B) and D)
F) B) and C)

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When comparing the genomes of prokaryotes verse eukaryotes,it can be accurately stated that


A) eukaryotic genomes are larger than prokaryotic genomes.
B) eukaryotic genomes are smaller than prokaryotic genomes.
C) the size of the organism determines the size of the genome.
D) larger and more complex organisms have more genes than smaller,less complex organisms.

E) A) and B)
F) All of the above

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The sequencing method that cuts the DNA of an entire chromosome into small fragments and then clones these fragments is called


A) shotgun sequencing.
B) clone-by-clone sequencing.
C) RFLP sequencing.
D) consensus sequencing.

E) All of the above
F) None of the above

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The best technique for detecting chromosomal abnormalities is


A) EST
B) FISH
C) STS
D) SNP

E) A) and B)
F) A) and C)

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The relative location of genes on a chromosome as determined by recombination frequencies is illustrated in a ________ map.


A) DNA
B) genetic
C) chromosomal
D) physical

E) None of the above
F) A) and B)

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In the United States it is currently legal for a company to patent genes.

A) True
B) False

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Microarrays are created by robotically placing DNA on to a microscope slide and probing with


A) RNA from the tissue of interest.
B) another DNA from the tissue of interest.
C) SNPs from the tissue of interest.
D) STSs from the tissue of interest.
E) clone-by-clone sequencing.

F) B) and E)
G) All of the above

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Sequences of DNA assembled by identifying overlaps among smaller DNA segments are known as


A) single strand polymorphisms.
B) synteny.
C) draft sequences.
D) the proteome.
E) a contig.

F) A) and E)
G) C) and D)

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The reason segmental duplications pose a logistical challenge in the proper alignment of DNA sequences is that they


A) are inherently repetitive.
B) contain large numbers of LINEs,which interfere with sequence annotation.
C) interfere with BLAST analysis.
D) are often found in areas of constitutive heterochromatin.

E) A) and B)
F) A) and C)

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When comparing the actual number of genes,the organism with the highest number is


A) rice.
B) human.
C) fruit fly.
D) yeast.

E) All of the above
F) A) and D)

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A defining characteristic of draft sequences is that they have


A) many gaps in regions of highly repetitive DNA.
B) less than 1 error in 10,000 nucleotides.
C) been found in various proteomes across the eukaryote life forms.
D) been produced by alternative splicing.
E) several problems,the main one being their contiguous DNA fragments.

F) B) and C)
G) A) and B)

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The current estimates of the ENCODE project for percent functionality of the human genome based on the ENCODE definition of functionality is ________ the estimate of functionality based on the selected-effect functionality definition.


A) greater than
B) less than
C) equal to

D) B) and C)
E) A) and C)

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To avoid confusion and facilitate ease of data interpretation,researchers working on cloned DNA from the same species use


A) restriction fragment length polymorphisms.
B) shotgun sequencing.
C) sequenced-tagged sites.
D) clone by clone sequencing.
E) consensus sequencing.

F) A) and D)
G) A) and E)

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Every cell within one organism has the same genome.In what way(s) can these cells differ from each other? (Select all that apply)


A) Number of chromosomes
B) Ratio of organelles
C) Proteins produced
D) Number of genes in the DNA
E) Surface area of cell membrane

F) All of the above
G) A) and B)

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The majority of DNA in a human can be described as


A) composed of short interspersed elements.
B) noncoding.
C) simple sequence repeats.
D) segmental duplications.
E) structural.

F) All of the above
G) A) and E)

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Distances on a genetic map are measured in ________ units.


A) centromere
B) DNA
C) dalton
D) centimorgan

E) A) and B)
F) A) and C)

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Your research group has recently determined the complete genomic sequence of the organism Examus biologisium.You instruct your group to begin sequence annotation,which involves


A) shotgun cloning.
B) the alignment of contigs.
C) the identification of open reading frames.
D) the construction of a genetic map.

E) All of the above
F) A) and D)

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Rice and its grain relatives,maize,barley,and wheat,diverged from a common ancestor 50 million years ago.However,the chromosomes of these plants demonstrate extensive conserved arrangements of segments.This phenomenon is called


A) linkage disequilibrium.
B) single nucleotide polymorphisms.
C) contig.
D) synteny.
E) expressed sequence equilibrium.

F) C) and D)
G) A) and E)

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The inclusive term that describes all of the DNA in the nucleus of a cell is its


A) genome.
B) chromosome.
C) gene.
D) proteome.

E) B) and C)
F) A) and C)

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You are studying a novel protein.To learn more about it,you performed a screen in yeast to identify proteins that could interact with it.From the screen you got a clone for a second gene.You had the clone sequenced,and you translated the gene sequence on your computer.What is the next logical step to learn more about the function of these two proteins?


A) Run a BLAST search.
B) Identify the intron/exon organization.
C) Localize the gene to a specific chromosomal region.
D) Search the human genome sequence for your clone.

E) All of the above
F) A) and B)

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